Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL42976.1 | KJL42979.1 | RS81_00940 | RS81_00943 | DEAD/DEAH box helicase. | Hypothetical protein. | 0.487 |
KJL42976.1 | fbiB_1 | RS81_00940 | RS81_00941 | DEAD/DEAH box helicase. | Coenzyme F420:L-glutamate ligase. | 0.773 |
KJL42976.1 | mshD_2 | RS81_00940 | RS81_00942 | DEAD/DEAH box helicase. | Mycothiol acetyltransferase. | 0.693 |
KJL42979.1 | KJL42976.1 | RS81_00943 | RS81_00940 | Hypothetical protein. | DEAD/DEAH box helicase. | 0.487 |
KJL42979.1 | acpP | RS81_00943 | RS81_02880 | Hypothetical protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.680 |
KJL42979.1 | fabD | RS81_00943 | RS81_02882 | Hypothetical protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.734 |
KJL42979.1 | fadB | RS81_00943 | RS81_02922 | Hypothetical protein. | Fatty acid oxidation complex subunit alpha. | 0.663 |
KJL42979.1 | fadJ | RS81_00943 | RS81_01719 | Hypothetical protein. | Fatty acid oxidation complex subunit alpha. | 0.611 |
KJL42979.1 | fbiB_1 | RS81_00943 | RS81_00941 | Hypothetical protein. | Coenzyme F420:L-glutamate ligase. | 0.507 |
KJL42979.1 | mshD_2 | RS81_00943 | RS81_00942 | Hypothetical protein. | Mycothiol acetyltransferase. | 0.538 |
KJL42979.1 | polS | RS81_00943 | RS81_00505 | Hypothetical protein. | Sorbitol dehydrogenase. | 0.458 |
KJL42979.1 | ribD_2 | RS81_00943 | RS81_01864 | Hypothetical protein. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.454 |
KJL42979.1 | secA | RS81_00943 | RS81_00862 | Hypothetical protein. | Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.622 |
acpP | KJL42979.1 | RS81_02880 | RS81_00943 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Hypothetical protein. | 0.680 |
acpP | fabD | RS81_02880 | RS81_02882 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Malonyl CoA-acyl carrier protein transacylase. | 0.999 |
acpP | fadB | RS81_02880 | RS81_02922 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Fatty acid oxidation complex subunit alpha. | 0.422 |
acpP | fadJ | RS81_02880 | RS81_01719 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Fatty acid oxidation complex subunit alpha. | 0.422 |
acpP | secA | RS81_02880 | RS81_00862 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.792 |
fabD | KJL42979.1 | RS81_02882 | RS81_00943 | Malonyl CoA-acyl carrier protein transacylase. | Hypothetical protein. | 0.734 |
fabD | acpP | RS81_02882 | RS81_02880 | Malonyl CoA-acyl carrier protein transacylase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.999 |
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