STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL42617.1Hypothetical protein. (352 aa)    
Predicted Functional Partners:
apr_1
Subtilisin Carlsberg precursor; Belongs to the peptidase S8 family.
 
     0.852
aprE
Subtilisin E precursor.
 
     0.612
KJL38682.1
Bacterial extracellular solute-binding protein.
  
     0.460
ugpB
Sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor.
  
     0.425
KJL40000.1
Carboxymuconolactone decarboxylase family protein.
  
     0.422
KJL38425.1
Hypothetical protein.
  
     0.414
Your Current Organism:
Microbacterium ketosireducens
NCBI taxonomy Id: 92835
Other names: Aureibacterium ketoreductum, Aureobacterium ketoreductum, CIP 105732, DSM 12510, IFO 14548, JCM 12078, M. ketosireducens, NBRC 14548, VKM Ac-2082
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.