STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylB_2Aryl-alcohol dehydrogenase. (537 aa)    
Predicted Functional Partners:
adh_2
Alcohol dehydrogenase.
  
 
0.872
neoA
2-deoxy-scyllo-inosamine dehydrogenase.
  
 
0.850
idnD
L-idonate 5-dehydrogenase (NAD(P)(+)).
  
 
  0.779
lcfB_2
Long-chain-fatty-acid--CoA ligase.
    
  0.775
drrA_4
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
     0.655
KJL40121.1
ABC-2 family transporter protein.
 
     0.651
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
     
 0.633
csoR
Copper-sensing transcriptional repressor CsoR.
  
  
 0.614
KJL40120.1
MarR family protein.
       0.601
tadA
tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
  0.591
Your Current Organism:
Microbacterium ketosireducens
NCBI taxonomy Id: 92835
Other names: Aureibacterium ketoreductum, Aureobacterium ketoreductum, CIP 105732, DSM 12510, IFO 14548, JCM 12078, M. ketosireducens, NBRC 14548, VKM Ac-2082
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