STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL40014.1Bacterial extracellular solute-binding protein, family 5 Middle. (621 aa)    
Predicted Functional Partners:
oppC_1
Oligopeptide transport system permease protein OppC.
 
 0.945
dppB_2
Dipeptide transport system permease protein DppB.
 
 0.940
gsiA_3
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 
 0.756
oppD_5
Oligopeptide transport ATP-binding protein OppD.
  
 0.735
ddpD
Putative D,D-dipeptide transport ATP-binding protein DdpD.
  
 0.735
KJL40017.1
Hypothetical protein.
  
     0.721
oppD_1
Oligopeptide transport ATP-binding protein OppD.
  
 
 0.659
oppD_3
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
  
 
 0.658
gsiC_3
Glutathione transport system permease protein GsiC.
  
 0.647
gsiC_5
Glutathione transport system permease protein GsiC.
  
 0.647
Your Current Organism:
Microbacterium ketosireducens
NCBI taxonomy Id: 92835
Other names: Aureibacterium ketoreductum, Aureobacterium ketoreductum, CIP 105732, DSM 12510, IFO 14548, JCM 12078, M. ketosireducens, NBRC 14548, VKM Ac-2082
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