Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL39503.1 | nagB_2 | RS81_01920 | RS81_01921 | Hypothetical protein. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.598 |
KJL39503.1 | nanK | RS81_01920 | RS81_01922 | Hypothetical protein. | N-acetylmannosamine kinase. | 0.598 |
KJL39503.1 | sugB_2 | RS81_01920 | RS81_01923 | Hypothetical protein. | Trehalose transport system permease protein SugB. | 0.499 |
KJL39503.1 | ycjO | RS81_01920 | RS81_01924 | Hypothetical protein. | Inner membrane ABC transporter permease protein YcjO. | 0.499 |
nagB_2 | KJL39503.1 | RS81_01921 | RS81_01920 | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | Hypothetical protein. | 0.598 |
nagB_2 | nanK | RS81_01921 | RS81_01922 | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | N-acetylmannosamine kinase. | 0.807 |
nagB_2 | sugB_2 | RS81_01921 | RS81_01923 | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | Trehalose transport system permease protein SugB. | 0.671 |
nagB_2 | ycjO | RS81_01921 | RS81_01924 | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | Inner membrane ABC transporter permease protein YcjO. | 0.671 |
nanK | KJL39503.1 | RS81_01922 | RS81_01920 | N-acetylmannosamine kinase. | Hypothetical protein. | 0.598 |
nanK | nagB_2 | RS81_01922 | RS81_01921 | N-acetylmannosamine kinase. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.807 |
nanK | sugB_2 | RS81_01922 | RS81_01923 | N-acetylmannosamine kinase. | Trehalose transport system permease protein SugB. | 0.671 |
nanK | ycjO | RS81_01922 | RS81_01924 | N-acetylmannosamine kinase. | Inner membrane ABC transporter permease protein YcjO. | 0.671 |
sugB_2 | KJL39503.1 | RS81_01923 | RS81_01920 | Trehalose transport system permease protein SugB. | Hypothetical protein. | 0.499 |
sugB_2 | nagB_2 | RS81_01923 | RS81_01921 | Trehalose transport system permease protein SugB. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.671 |
sugB_2 | nanK | RS81_01923 | RS81_01922 | Trehalose transport system permease protein SugB. | N-acetylmannosamine kinase. | 0.671 |
sugB_2 | ycjO | RS81_01923 | RS81_01924 | Trehalose transport system permease protein SugB. | Inner membrane ABC transporter permease protein YcjO. | 0.997 |
ycjO | KJL39503.1 | RS81_01924 | RS81_01920 | Inner membrane ABC transporter permease protein YcjO. | Hypothetical protein. | 0.499 |
ycjO | nagB_2 | RS81_01924 | RS81_01921 | Inner membrane ABC transporter permease protein YcjO. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.671 |
ycjO | nanK | RS81_01924 | RS81_01922 | Inner membrane ABC transporter permease protein YcjO. | N-acetylmannosamine kinase. | 0.671 |
ycjO | sugB_2 | RS81_01924 | RS81_01923 | Inner membrane ABC transporter permease protein YcjO. | Trehalose transport system permease protein SugB. | 0.997 |