Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
crtB_1 | crtB_2 | RS81_00751 | RS81_00798 | All-trans-phytoene synthase. | All-trans-phytoene synthase. | 0.971 |
crtB_1 | idi_4 | RS81_00751 | RS81_02069 | All-trans-phytoene synthase. | Isopentenyl-diphosphate Delta-isomerase; Belongs to the Nudix hydrolase family. | 0.501 |
crtB_2 | crtB_1 | RS81_00798 | RS81_00751 | All-trans-phytoene synthase. | All-trans-phytoene synthase. | 0.971 |
crtB_2 | idi_4 | RS81_00798 | RS81_02069 | All-trans-phytoene synthase. | Isopentenyl-diphosphate Delta-isomerase; Belongs to the Nudix hydrolase family. | 0.501 |
idi_4 | crtB_1 | RS81_02069 | RS81_00751 | Isopentenyl-diphosphate Delta-isomerase; Belongs to the Nudix hydrolase family. | All-trans-phytoene synthase. | 0.501 |
idi_4 | crtB_2 | RS81_02069 | RS81_00798 | Isopentenyl-diphosphate Delta-isomerase; Belongs to the Nudix hydrolase family. | All-trans-phytoene synthase. | 0.501 |
idi_4 | metG | RS81_02069 | RS81_02071 | Isopentenyl-diphosphate Delta-isomerase; Belongs to the Nudix hydrolase family. | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.585 |
idi_4 | panC | RS81_02069 | RS81_00196 | Isopentenyl-diphosphate Delta-isomerase; Belongs to the Nudix hydrolase family. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.473 |
idi_4 | ycfH | RS81_02069 | RS81_02070 | Isopentenyl-diphosphate Delta-isomerase; Belongs to the Nudix hydrolase family. | Putative deoxyribonuclease YcfH. | 0.802 |
metG | idi_4 | RS81_02071 | RS81_02069 | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Isopentenyl-diphosphate Delta-isomerase; Belongs to the Nudix hydrolase family. | 0.585 |
metG | ycfH | RS81_02071 | RS81_02070 | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Putative deoxyribonuclease YcfH. | 0.906 |
panC | idi_4 | RS81_00196 | RS81_02069 | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | Isopentenyl-diphosphate Delta-isomerase; Belongs to the Nudix hydrolase family. | 0.473 |
ycfH | idi_4 | RS81_02070 | RS81_02069 | Putative deoxyribonuclease YcfH. | Isopentenyl-diphosphate Delta-isomerase; Belongs to the Nudix hydrolase family. | 0.802 |
ycfH | metG | RS81_02070 | RS81_02071 | Putative deoxyribonuclease YcfH. | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.906 |