STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL38682.1Bacterial extracellular solute-binding protein. (465 aa)    
Predicted Functional Partners:
araP_4
L-arabinose transport system permease protein AraP.
 
  0.954
araQ_12
L-arabinose transport system permease protein AraQ.
 
  0.918
araP_5
L-arabinose transport system permease protein AraP.
 
  0.907
araQ_14
L-arabinose transport system permease protein AraQ.
 
  0.878
sugB_2
Trehalose transport system permease protein SugB.
  
 0.876
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
  
 0.869
araP_1
L-arabinose transport system permease protein AraP.
  
  0.729
lacF_4
Lactose transport system permease protein LacF.
  
  0.729
araP_2
L-arabinose transport system permease protein AraP.
  
  0.729
ugpA_4
Sn-glycerol-3-phosphate transport system permease protein UgpA.
  
  0.729
Your Current Organism:
Microbacterium ketosireducens
NCBI taxonomy Id: 92835
Other names: Aureibacterium ketoreductum, Aureobacterium ketoreductum, CIP 105732, DSM 12510, IFO 14548, JCM 12078, M. ketosireducens, NBRC 14548, VKM Ac-2082
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.