Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL38718.1 | araA | RS81_02513 | RS81_02514 | Hypothetical protein; FGGY family of carbohydrate kinases, C-terminal domain. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.897 |
KJL38718.1 | araD | RS81_02513 | RS81_02512 | Hypothetical protein; FGGY family of carbohydrate kinases, C-terminal domain. | L-ribulose-5-phosphate 4-epimerase. | 0.920 |
KJL38718.1 | fruA | RS81_02513 | RS81_02364 | Hypothetical protein; FGGY family of carbohydrate kinases, C-terminal domain. | PTS system fructose-specific EIIABC component. | 0.459 |
KJL38718.1 | rpe | RS81_02513 | RS81_02985 | Hypothetical protein; FGGY family of carbohydrate kinases, C-terminal domain. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.464 |
KJL38718.1 | tsaC1 | RS81_02513 | RS81_00973 | Hypothetical protein; FGGY family of carbohydrate kinases, C-terminal domain. | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2. | 0.590 |
araA | KJL38718.1 | RS81_02514 | RS81_02513 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Hypothetical protein; FGGY family of carbohydrate kinases, C-terminal domain. | 0.897 |
araA | araD | RS81_02514 | RS81_02512 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-ribulose-5-phosphate 4-epimerase. | 0.993 |
araA | fruA | RS81_02514 | RS81_02364 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | PTS system fructose-specific EIIABC component. | 0.739 |
araA | xylB_1 | RS81_02514 | RS81_00282 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Xylulose kinase; Belongs to the FGGY kinase family. | 0.639 |
araD | KJL38718.1 | RS81_02512 | RS81_02513 | L-ribulose-5-phosphate 4-epimerase. | Hypothetical protein; FGGY family of carbohydrate kinases, C-terminal domain. | 0.920 |
araD | araA | RS81_02512 | RS81_02514 | L-ribulose-5-phosphate 4-epimerase. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.993 |
araD | citE | RS81_02512 | RS81_03057 | L-ribulose-5-phosphate 4-epimerase. | Citrate lyase subunit beta-like protein; Belongs to the HpcH/HpaI aldolase family. | 0.746 |
araD | fruA | RS81_02512 | RS81_02364 | L-ribulose-5-phosphate 4-epimerase. | PTS system fructose-specific EIIABC component. | 0.663 |
araD | rpe | RS81_02512 | RS81_02985 | L-ribulose-5-phosphate 4-epimerase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.878 |
araD | tpiA | RS81_02512 | RS81_03109 | L-ribulose-5-phosphate 4-epimerase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.620 |
araD | tsaC1 | RS81_02512 | RS81_00973 | L-ribulose-5-phosphate 4-epimerase. | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2. | 0.614 |
araD | uxaC | RS81_02512 | RS81_00495 | L-ribulose-5-phosphate 4-epimerase. | Uronate isomerase. | 0.652 |
araD | xylB_1 | RS81_02512 | RS81_00282 | L-ribulose-5-phosphate 4-epimerase. | Xylulose kinase; Belongs to the FGGY kinase family. | 0.901 |
araD | xylB_3 | RS81_02512 | RS81_01748 | L-ribulose-5-phosphate 4-epimerase. | Xylulose kinase. | 0.647 |
citE | araD | RS81_03057 | RS81_02512 | Citrate lyase subunit beta-like protein; Belongs to the HpcH/HpaI aldolase family. | L-ribulose-5-phosphate 4-epimerase. | 0.746 |
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