STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL38390.1Hypothetical protein. (672 aa)    
Predicted Functional Partners:
melB
Melibiose carrier protein.
       0.773
KJL38389.1
Bacterial alpha-L-rhamnosidase.
 
     0.686
KJL39236.1
Hypothetical protein.
    
   0.675
KJL38692.1
Cellulase (glycosyl hydrolase family 5).
    
  0.664
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
   0.650
cel5A
Endoglucanase 5A.
 
 
 0.636
lacZ_6
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
    
  0.632
lvr_5
Levodione reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.623
eccCa1_1
ESX-1 secretion system protein EccCa1.
    
   0.613
eccCa1_2
ESX-1 secretion system protein EccCa1.
    
  0.613
Your Current Organism:
Microbacterium ketosireducens
NCBI taxonomy Id: 92835
Other names: Aureibacterium ketoreductum, Aureobacterium ketoreductum, CIP 105732, DSM 12510, IFO 14548, JCM 12078, M. ketosireducens, NBRC 14548, VKM Ac-2082
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