Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL38389.1 | KJL38390.1 | RS81_02660 | RS81_02661 | Bacterial alpha-L-rhamnosidase. | Hypothetical protein. | 0.686 |
KJL38389.1 | lacZ_6 | RS81_02660 | RS81_02659 | Bacterial alpha-L-rhamnosidase. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.855 |
KJL38389.1 | lvr_5 | RS81_02660 | RS81_02658 | Bacterial alpha-L-rhamnosidase. | Levodione reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.850 |
KJL38389.1 | melB | RS81_02660 | RS81_02662 | Bacterial alpha-L-rhamnosidase. | Melibiose carrier protein. | 0.623 |
KJL38390.1 | KJL38389.1 | RS81_02661 | RS81_02660 | Hypothetical protein. | Bacterial alpha-L-rhamnosidase. | 0.686 |
KJL38390.1 | KJL38692.1 | RS81_02661 | RS81_02487 | Hypothetical protein. | Cellulase (glycosyl hydrolase family 5). | 0.664 |
KJL38390.1 | KJL39236.1 | RS81_02661 | RS81_02079 | Hypothetical protein. | Hypothetical protein. | 0.675 |
KJL38390.1 | acpP | RS81_02661 | RS81_02880 | Hypothetical protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.650 |
KJL38390.1 | cel5A | RS81_02661 | RS81_03252 | Hypothetical protein. | Endoglucanase 5A. | 0.636 |
KJL38390.1 | eccCa1_1 | RS81_02661 | RS81_00632 | Hypothetical protein. | ESX-1 secretion system protein EccCa1. | 0.613 |
KJL38390.1 | eccCa1_2 | RS81_02661 | RS81_01949 | Hypothetical protein. | ESX-1 secretion system protein EccCa1. | 0.613 |
KJL38390.1 | lacZ_6 | RS81_02661 | RS81_02659 | Hypothetical protein. | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | 0.632 |
KJL38390.1 | lvr_5 | RS81_02661 | RS81_02658 | Hypothetical protein. | Levodione reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.623 |
KJL38390.1 | melB | RS81_02661 | RS81_02662 | Hypothetical protein. | Melibiose carrier protein. | 0.773 |
KJL38692.1 | KJL38390.1 | RS81_02487 | RS81_02661 | Cellulase (glycosyl hydrolase family 5). | Hypothetical protein. | 0.664 |
KJL38692.1 | KJL39236.1 | RS81_02487 | RS81_02079 | Cellulase (glycosyl hydrolase family 5). | Hypothetical protein. | 0.966 |
KJL39236.1 | KJL38390.1 | RS81_02079 | RS81_02661 | Hypothetical protein. | Hypothetical protein. | 0.675 |
KJL39236.1 | KJL38692.1 | RS81_02079 | RS81_02487 | Hypothetical protein. | Cellulase (glycosyl hydrolase family 5). | 0.966 |
acpP | KJL38390.1 | RS81_02880 | RS81_02661 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Hypothetical protein. | 0.650 |
cel5A | KJL38390.1 | RS81_03252 | RS81_02661 | Endoglucanase 5A. | Hypothetical protein. | 0.636 |
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