Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL37424.1 | fac-dex | RS81_03178 | RS81_03177 | Hypothetical protein; Activator of Hsp90 ATPase homolog 1-like protein. | Fluoroacetate dehalogenase. | 0.646 |
KJL37424.1 | fieF | RS81_03178 | RS81_03176 | Hypothetical protein; Activator of Hsp90 ATPase homolog 1-like protein. | Ferrous-iron efflux pump FieF. | 0.418 |
KJL37424.1 | proC | RS81_03178 | RS81_03180 | Hypothetical protein; Activator of Hsp90 ATPase homolog 1-like protein. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.555 |
KJL37424.1 | rutA_1 | RS81_03178 | RS81_03175 | Hypothetical protein; Activator of Hsp90 ATPase homolog 1-like protein. | Pyrimidine monooxygenase RutA. | 0.418 |
KJL37424.1 | sdpR_1 | RS81_03178 | RS81_03179 | Hypothetical protein; Activator of Hsp90 ATPase homolog 1-like protein. | Transcriptional repressor SdpR. | 0.956 |
KJL38538.1 | sdpR_1 | RS81_02812 | RS81_03179 | HTH-type transcriptional regulator. | Transcriptional repressor SdpR. | 0.672 |
cmtR | sdpR_1 | RS81_01083 | RS81_03179 | HTH-type transcriptional regulator CmtR. | Transcriptional repressor SdpR. | 0.604 |
fac-dex | KJL37424.1 | RS81_03177 | RS81_03178 | Fluoroacetate dehalogenase. | Hypothetical protein; Activator of Hsp90 ATPase homolog 1-like protein. | 0.646 |
fac-dex | fieF | RS81_03177 | RS81_03176 | Fluoroacetate dehalogenase. | Ferrous-iron efflux pump FieF. | 0.580 |
fac-dex | proC | RS81_03177 | RS81_03180 | Fluoroacetate dehalogenase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.460 |
fac-dex | rutA_1 | RS81_03177 | RS81_03175 | Fluoroacetate dehalogenase. | Pyrimidine monooxygenase RutA. | 0.583 |
fac-dex | sdpR_1 | RS81_03177 | RS81_03179 | Fluoroacetate dehalogenase. | Transcriptional repressor SdpR. | 0.542 |
fieF | KJL37424.1 | RS81_03176 | RS81_03178 | Ferrous-iron efflux pump FieF. | Hypothetical protein; Activator of Hsp90 ATPase homolog 1-like protein. | 0.418 |
fieF | fac-dex | RS81_03176 | RS81_03177 | Ferrous-iron efflux pump FieF. | Fluoroacetate dehalogenase. | 0.580 |
fieF | rutA_1 | RS81_03176 | RS81_03175 | Ferrous-iron efflux pump FieF. | Pyrimidine monooxygenase RutA. | 0.773 |
fieF | sdpR_1 | RS81_03176 | RS81_03179 | Ferrous-iron efflux pump FieF. | Transcriptional repressor SdpR. | 0.420 |
proC | KJL37424.1 | RS81_03180 | RS81_03178 | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | Hypothetical protein; Activator of Hsp90 ATPase homolog 1-like protein. | 0.555 |
proC | fac-dex | RS81_03180 | RS81_03177 | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | Fluoroacetate dehalogenase. | 0.460 |
proC | sdpR_1 | RS81_03180 | RS81_03179 | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | Transcriptional repressor SdpR. | 0.565 |
rutA_1 | KJL37424.1 | RS81_03175 | RS81_03178 | Pyrimidine monooxygenase RutA. | Hypothetical protein; Activator of Hsp90 ATPase homolog 1-like protein. | 0.418 |
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