Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL37526.1 | KJL40069.1 | RS81_03283 | RS81_01658 | Putative FAD-linked oxidoreductase. | Lactate 2-monooxygenase. | 0.868 |
KJL37526.1 | accA1_1 | RS81_03283 | RS81_01417 | Putative FAD-linked oxidoreductase. | Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.663 |
KJL37526.1 | ilvB1 | RS81_03283 | RS81_02395 | Putative FAD-linked oxidoreductase. | Acetolactate synthase large subunit IlvB1. | 0.614 |
KJL37526.1 | ilvH | RS81_03283 | RS81_02394 | Putative FAD-linked oxidoreductase. | Putative acetolactate synthase small subunit. | 0.675 |
KJL37526.1 | ldh2 | RS81_03283 | RS81_00891 | Putative FAD-linked oxidoreductase. | L-lactate dehydrogenase 2; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.633 |
KJL37526.1 | leuA | RS81_03283 | RS81_02860 | Putative FAD-linked oxidoreductase. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.670 |
KJL37526.1 | mdlB | RS81_03283 | RS81_03536 | Putative FAD-linked oxidoreductase. | (S)-mandelate dehydrogenase. | 0.868 |
KJL37526.1 | pyk | RS81_03283 | RS81_02999 | Putative FAD-linked oxidoreductase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.759 |
KJL37526.1 | xsc | RS81_03283 | RS81_01886 | Putative FAD-linked oxidoreductase. | Sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family. | 0.614 |
KJL40069.1 | KJL37526.1 | RS81_01658 | RS81_03283 | Lactate 2-monooxygenase. | Putative FAD-linked oxidoreductase. | 0.868 |
KJL40069.1 | accA1_1 | RS81_01658 | RS81_01417 | Lactate 2-monooxygenase. | Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.564 |
KJL40069.1 | aceE | RS81_01658 | RS81_02884 | Lactate 2-monooxygenase. | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.560 |
KJL40069.1 | ilvB1 | RS81_01658 | RS81_02395 | Lactate 2-monooxygenase. | Acetolactate synthase large subunit IlvB1. | 0.461 |
KJL40069.1 | ilvH | RS81_01658 | RS81_02394 | Lactate 2-monooxygenase. | Putative acetolactate synthase small subunit. | 0.557 |
KJL40069.1 | ldh2 | RS81_01658 | RS81_00891 | Lactate 2-monooxygenase. | L-lactate dehydrogenase 2; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.557 |
KJL40069.1 | leuA | RS81_01658 | RS81_02860 | Lactate 2-monooxygenase. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.591 |
KJL40069.1 | mdlB | RS81_01658 | RS81_03536 | Lactate 2-monooxygenase. | (S)-mandelate dehydrogenase. | 0.808 |
KJL40069.1 | pyk | RS81_01658 | RS81_02999 | Lactate 2-monooxygenase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.619 |
KJL40069.1 | xsc | RS81_01658 | RS81_01886 | Lactate 2-monooxygenase. | Sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family. | 0.461 |
accA1_1 | KJL37526.1 | RS81_01417 | RS81_03283 | Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Putative FAD-linked oxidoreductase. | 0.663 |
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