STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC30274.1Hypothetical protein; Belongs to the UPF0276 family. (287 aa)    
Predicted Functional Partners:
SFC30226.1
Hypothetical protein.
  
 0.999
SFC30317.1
Uncharacterized membrane protein.
 
  
 0.988
SFC30186.1
Putative oxidoreductase.
 
  
 0.982
apxIA_1
Serine protease, subtilisin family.
   
    0.780
SFD73605.1
Type IV secretion system protein VirB3.
   
    0.699
hlyA_3
Hemolysin-type calcium-binding repeat-containing protein.
   
    0.657
catD_2
Putative oxidoreductase.
  
  
 0.630
SFD76636.1
Hypothetical protein.
   
    0.602
virB4
Type IV secretion system protein VirB4.
   
    0.601
SFD15543.1
Hypothetical protein.
   
    0.511
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.