STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC39864.1TIGR02217 family protein. (210 aa)    
Predicted Functional Partners:
SFC39678.1
Phage major tail protein, TP901-1 family.
 
 
   0.999
SFC39912.1
Phage conserved hypothetical protein BR0599.
 
 
   0.999
SFC40069.1
Putative phage tail protein.
 
 
   0.999
SFC39528.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
 
   0.997
SFC39586.1
Head-tail adaptor.
 
 
 
 0.997
SFC39632.1
Protein of unknown function.
 
   0.997
SFC39477.1
Phage major capsid protein, HK97 family.
 
 
   0.996
SFC39343.1
Phage portal protein, HK97 family.
 
 
   0.995
spr
Putative phage cell wall peptidase, NlpC/P60 family.
 
     0.965
SFC39821.1
Phage tail tape measure protein, lambda family.
 
    0.954
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.