STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gcvA_1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (314 aa)    
Predicted Functional Partners:
yddG
EamA-like transporter family protein.
 
    0.814
cynR
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.706
cmpR_1
ModE molybdate transport repressor domain-containing protein; Belongs to the LysR transcriptional regulatory family.
  
     0.678
hcaR_1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.673
cbl_1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.656
gltC
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.651
cbl_2
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.635
gltR_2
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.555
SFC57042.1
Hypothetical protein.
       0.539
oxyR_1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.535
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.