STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC60028.1S-adenosyl-L-methionine methyltransferase. (158 aa)    
Predicted Functional Partners:
SFC60073.1
Hypothetical protein.
 
     0.946
SFC60110.1
Predicted glycosyl transferase.
 
     0.946
kanE_1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.945
SFC60245.1
Predicted glycosyl transferase.
 
     0.945
pimB_1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.940
SFC60145.1
Probable phosphoglycerate mutase.
 
     0.922
ykuT_1
Small-conductance mechanosensitive channel.
 
     0.831
yheH
Cyclic nucleotide-binding protein.
  
     0.774
SFC60578.1
Cyclic nucleotide-binding protein.
  
     0.774
SFC60448.1
Peptide/nickel transport system substrate-binding protein.
  
     0.770
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
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