STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC63795.1Putative membrane protein. (333 aa)    
Predicted Functional Partners:
SFC63697.1
Hypothetical protein.
 
  
 0.994
yjaB
Acetyltransferase (GNAT) domain-containing protein.
       0.818
truA
tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
       0.715
mepA_2
Murein endopeptidase. Metallo peptidase. MEROPS family M74.
  
     0.583
SFC99264.1
Invasion protein IalB, involved in pathogenesis.
  
     0.578
SFC03238.1
HemY protein.
  
     0.577
SFC84543.1
Protein of unknown function.
  
     0.557
SFC93536.1
Small-conductance mechanosensitive channel.
  
     0.513
SFC04224.1
Double-strand break repair protein AddB.
  
     0.494
SFD23449.1
Lysophospholipase.
  
     0.484
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.