STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
garR3-hydroxyisobutyrate dehydrogenase. (290 aa)    
Predicted Functional Partners:
mmsA
Methylmalonate-semialdehyde dehydrogenase [acylating].
 
  0.903
fadJ
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.877
acuI
Putative quinone oxidoreductase, YhdH/YhfP family.
  
  
  0.863
ald_2
Aldehyde dehydrogenase (NAD+).
 
 
  0.856
SFD47550.1
acetyl-CoA synthetase.
    
  0.850
gltA
Citrate synthase; Belongs to the citrate synthase family.
  
 
  0.838
Hgd
3-hydroxyisobutyrate dehydrogenase.
  
  
 
0.797
mmsB
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
  
  
 
0.781
ttuD
Hydroxypyruvate reductase.
 
  
 0.759
accA1_2
Biotin carboxyl carrier protein /biotin carboxylase.
  
 
  0.740
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.