STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC93144.1Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain. (77 aa)    
Predicted Functional Partners:
SFC93172.1
Protein of unknown function.
       0.852
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.686
SFD61354.1
Hypothetical protein.
  
     0.564
SFD61424.1
Hypothetical protein.
  
     0.540
SFD34334.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
     0.515
SFD44222.1
SH3-like domain-containing protein.
  
     0.511
SFC93258.1
Hypothetical protein.
 
    0.500
SFD67131.1
Predicted N-formylglutamate amidohydrolase.
  
     0.479
SFD42061.1
Predicted N-formylglutamate amidohydrolase.
  
     0.467
moaD
Molybdopterin synthase subunit MoaD.
  
     0.435
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.