STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msmE_1Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-). (418 aa)    
Predicted Functional Partners:
lacG
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.961
araP
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.905
rafA
Alpha-galactosidase.
 
    0.792
SFC07857.1
Beta-galactosidase.
 
     0.779
kdgR_2
Transcriptional regulator, IclR family.
  
    0.720
lacF_4
Lactose transport system permease protein LacF; Maltose ABC transporter membrane protein/trehalose ABC transporter membrane protein/sucrose ABC transporter membrane protein.
  
  0.699
ugpC_7
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  0.650
araQ_4
L-arabinose transport system permease protein AraQ; Maltose ABC transporter membrane protein/trehalose ABC transporter membrane protein/sucrose ABC transporter membrane protein.
  
  0.639
lacF_5
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
   
  0.598
ugpA
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
   
  0.598
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.