STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dadA_1D-amino-acid dehydrogenase. (416 aa)    
Predicted Functional Partners:
gcvT_12
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.930
gcvT_13
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.930
gcvT_3
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.930
gltB_2
Glutamate synthase (NADPH) large subunit.
  
 
 0.803
siaT_7
TRAP transporter, 4TM/12TM fusion protein.
       0.773
SFC82376.1
4-hydroxyproline epimerase; Belongs to the proline racemase family.
 
  
  0.724
SFC35770.1
Sarcosine oxidase subunit delta.
  
 0.696
SFC45445.1
Sarcosine oxidase subunit gamma.
  
  0.685
SFC35846.1
Sarcosine oxidase subunit gamma.
  
  0.661
SFD22413.1
Sarcosine oxidase subunit gamma.
   
  0.643
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.