STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aapJ_2General L-amino acid transport system substrate-binding protein. (338 aa)    
Predicted Functional Partners:
yhdY_2
L-glutamine ABC transporter membrane protein/L-glutamate ABC transporter membrane protein/L-aspartate ABC transporter membrane protein/L-asparagine ABC transporter membrane protein.
 
 0.997
glnM
L-glutamine ABC transporter membrane protein/L-glutamate ABC transporter membrane protein/L-aspartate ABC transporter membrane protein/L-asparagine ABC transporter membrane protein.
 
 
 0.996
glnQ_2
L-glutamine ABC transporter ATP-binding protein.
 
 0.978
glnQ_1
General L-amino acid transport system ATP-binding protein.
 
 0.958
yhdY_1
General L-amino acid transport system permease protein.
 
 0.949
gltK
General L-amino acid transport system permease protein.
 
 
 0.941
yxeN
Amino acid ABC transporter membrane protein, PAAT family.
 
 0.885
SFC76412.1
GAF domain-containing protein.
   
 0.800
gmr_2
Diguanylate cyclase/phosphodiesterase.
    
 0.597
occP
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 
  0.593
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
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