STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD40651.1Hypothetical protein. (307 aa)    
Predicted Functional Partners:
SFD72585.1
TRAP transporter, 4TM/12TM fusion protein.
    0.824
SFC45698.1
TRAP transporter, 4TM/12TM fusion protein.
    0.823
siaT_7
TRAP transporter, 4TM/12TM fusion protein.
    0.809
siaT_1
TRAP transporter, 4TM/12TM fusion protein.
    0.809
SFD40620.1
Transcriptional regulator, RpiR family.
       0.533
bioA
Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.487
kce_1
Uncharacterized conserved protein, DUF849 family.
 
     0.465
uspF_1
Nucleotide-binding universal stress protein, UspA family.
 
     0.440
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.