STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gabR_1Transcriptional regulator, GntR family. (495 aa)    
Predicted Functional Partners:
xsc
Sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family.
 
     0.781
tauA
Taurine transport system substrate-binding protein.
 
   
 0.607
tpa_1
Taurine-pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.513
SFD37383.1
DMSO reductase anchor subunit.
 
   
 0.483
SFD37215.1
Hypothetical protein.
       0.482
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.482
SFD37079.1
Hypothetical protein.
       0.465
SFD37118.1
Transcriptional regulator, ArsR family.
       0.465
lysN_1
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain.
  
  
 
0.445
lysN_2
Hypothetical protein.
  
  
 
0.438
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.