STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD42219.1Glycine betaine/proline transport system substrate-binding protein. (319 aa)    
Predicted Functional Partners:
opuAA
Glycine betaine/proline transport system ATP-binding protein.
 
 0.998
gbuA
Glycine betaine/proline transport system ATP-binding protein.
 
 0.995
opuAB_1
Glycine betaine/proline transport system permease protein.
 
 
 0.994
opuAB_2
ABC-type proline/glycine betaine transport system, permease component.
 
 
 0.968
proX_2
Glycine betaine/proline transport system substrate-binding protein.
  
  
  0.957
SFD42142.1
Thiamine kinase.
 
     0.906
gcvT_1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
 
     0.833
SFD42061.1
Predicted N-formylglutamate amidohydrolase.
 
     0.625
glpR_1
Transcriptional regulator, DeoR family.
 
     0.589
SFD42023.1
Glutamine synthetase.
  
    0.578
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.