STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD62549.1Citrate transporter. (621 aa)    
Predicted Functional Partners:
ttrA_2
Molydopterin dinucleotide binding domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.725
SFD62576.1
DMSO reductase anchor subunit.
 
     0.715
ttrB_2
Fe-S-cluster-containing dehydrogenase component.
 
     0.713
sauS
Sulfoacetaldehyde dehydrogenase.
 
    0.582
sauT
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
    0.548
mrpA
Multiple resistance and pH homeostasis protein A; Multisubunit potassium/proton antiporter, PhaA subunit /multisubunit potassium/proton antiporter, PhaB subunit.
     
 0.524
ydfH_3
Transcriptional regulator, GntR family.
       0.497
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
 
  
 0.477
SFC26858.1
Di-and tricarboxylate transporter.
 
   
0.440
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
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