STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rutR_1Transcriptional regulator, TetR family. (209 aa)    
Predicted Functional Partners:
fadB_1
methylthioacryloyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.496
cph2_2
Diguanylate cyclase/phosphodiesterase.
    
 
 0.484
uao
OHCU decarboxylase.
  
     0.480
SFC35205.1
NitT/TauT family transport system substrate-binding protein.
 
     0.460
allA
Ureidoglycolate lyase.
  
     0.458
dht
Dihydropyrimidinase.
 
     0.437
SFC76412.1
GAF domain-containing protein.
    
 
 0.435
tauB_2
NitT/TauT family transport system ATP-binding protein.
  
     0.428
amaB
N-carbamoyl-L-amino-acid hydrolase.
 
     0.409
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.