STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bisCBiotin sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (759 aa)    
Predicted Functional Partners:
birA
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
     
  0.900
ARO13412.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.889
gltB
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.887
ARO13409.1
Polysaccharide deacetylase.
 
     0.839
ARO13411.1
Isochorismatase hydrolase.
 
     0.828
pdaA
peptidoglycan-N-acetylmuramic acid deacetylase.
 
     0.821
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.821
cycA
Cytochrome c2.
  
 
 0.814
cyt
Cytochrome C, class I.
  
 
 0.814
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.790
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.