Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARO13409.1 | ARO13412.1 | BVG79_00049 | BVG79_00052 | Polysaccharide deacetylase. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.925 |
ARO13409.1 | ARO13415.1 | BVG79_00049 | BVG79_00055 | Polysaccharide deacetylase. | FAD dependent oxidoreductase. | 0.472 |
ARO13409.1 | bisC | BVG79_00049 | BVG79_00053 | Polysaccharide deacetylase. | Biotin sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.839 |
ARO13409.1 | lysR | BVG79_00049 | BVG79_00054 | Polysaccharide deacetylase. | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.625 |
ARO13409.1 | pdaA | BVG79_00049 | BVG79_00050 | Polysaccharide deacetylase. | peptidoglycan-N-acetylmuramic acid deacetylase. | 0.829 |
ARO13412.1 | ARO13409.1 | BVG79_00052 | BVG79_00049 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Polysaccharide deacetylase. | 0.925 |
ARO13412.1 | ARO13415.1 | BVG79_00052 | BVG79_00055 | Glyoxalase/bleomycin resistance protein/dioxygenase. | FAD dependent oxidoreductase. | 0.517 |
ARO13412.1 | bisC | BVG79_00052 | BVG79_00053 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Biotin sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.889 |
ARO13412.1 | lysR | BVG79_00052 | BVG79_00054 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.687 |
ARO13412.1 | metC | BVG79_00052 | BVG79_00057 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Cystathionine beta-lyase. | 0.459 |
ARO13412.1 | pdaA | BVG79_00052 | BVG79_00050 | Glyoxalase/bleomycin resistance protein/dioxygenase. | peptidoglycan-N-acetylmuramic acid deacetylase. | 0.910 |
ARO13415.1 | ARO13409.1 | BVG79_00055 | BVG79_00049 | FAD dependent oxidoreductase. | Polysaccharide deacetylase. | 0.472 |
ARO13415.1 | ARO13412.1 | BVG79_00055 | BVG79_00052 | FAD dependent oxidoreductase. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.517 |
ARO13415.1 | bisC | BVG79_00055 | BVG79_00053 | FAD dependent oxidoreductase. | Biotin sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.475 |
ARO13415.1 | lysR | BVG79_00055 | BVG79_00054 | FAD dependent oxidoreductase. | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.765 |
ARO13415.1 | metC | BVG79_00055 | BVG79_00057 | FAD dependent oxidoreductase. | Cystathionine beta-lyase. | 0.754 |
ARO13415.1 | pdaA | BVG79_00055 | BVG79_00050 | FAD dependent oxidoreductase. | peptidoglycan-N-acetylmuramic acid deacetylase. | 0.447 |
ARO13415.1 | sseA | BVG79_00055 | BVG79_00056 | FAD dependent oxidoreductase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.752 |
ARO15195.1 | gltB | BVG79_01853 | BVG79_02092 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Glutamate synthase (NADPH/NADH) large chain. | 0.594 |
ARO15195.1 | lysR | BVG79_01853 | BVG79_00054 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.666 |
page 1 of 4