Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARO13516.1 | ARO13517.1 | BVG79_00156 | BVG79_00157 | Hypothetical protein. | Regulator protein that represses frmRAB operon. | 0.572 |
ARO13516.1 | ARO13519.1 | BVG79_00156 | BVG79_00159 | Hypothetical protein. | Mitochondrial trans-2-enoyl-CoA reductase. | 0.773 |
ARO13516.1 | adhC | BVG79_00156 | BVG79_00155 | Hypothetical protein. | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.568 |
ARO13516.1 | fghA | BVG79_00156 | BVG79_00154 | Hypothetical protein. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.568 |
ARO13516.1 | gloA | BVG79_00156 | BVG79_00153 | Hypothetical protein. | Lactoylglutathione lyase. | 0.568 |
ARO13516.1 | ydhM | BVG79_00156 | BVG79_00158 | Hypothetical protein. | TetR family transcriptional regulator. | 0.773 |
ARO13517.1 | ARO13516.1 | BVG79_00157 | BVG79_00156 | Regulator protein that represses frmRAB operon. | Hypothetical protein. | 0.572 |
ARO13517.1 | ARO13519.1 | BVG79_00157 | BVG79_00159 | Regulator protein that represses frmRAB operon. | Mitochondrial trans-2-enoyl-CoA reductase. | 0.573 |
ARO13517.1 | adhC | BVG79_00157 | BVG79_00155 | Regulator protein that represses frmRAB operon. | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.958 |
ARO13517.1 | fghA | BVG79_00157 | BVG79_00154 | Regulator protein that represses frmRAB operon. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.919 |
ARO13517.1 | gloA | BVG79_00157 | BVG79_00153 | Regulator protein that represses frmRAB operon. | Lactoylglutathione lyase. | 0.774 |
ARO13517.1 | ydhM | BVG79_00157 | BVG79_00158 | Regulator protein that represses frmRAB operon. | TetR family transcriptional regulator. | 0.574 |
ARO13519.1 | ARO13516.1 | BVG79_00159 | BVG79_00156 | Mitochondrial trans-2-enoyl-CoA reductase. | Hypothetical protein. | 0.773 |
ARO13519.1 | ARO13517.1 | BVG79_00159 | BVG79_00157 | Mitochondrial trans-2-enoyl-CoA reductase. | Regulator protein that represses frmRAB operon. | 0.573 |
ARO13519.1 | adhC | BVG79_00159 | BVG79_00155 | Mitochondrial trans-2-enoyl-CoA reductase. | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.657 |
ARO13519.1 | fghA | BVG79_00159 | BVG79_00154 | Mitochondrial trans-2-enoyl-CoA reductase. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.570 |
ARO13519.1 | gloA | BVG79_00159 | BVG79_00153 | Mitochondrial trans-2-enoyl-CoA reductase. | Lactoylglutathione lyase. | 0.630 |
ARO13519.1 | ydhM | BVG79_00159 | BVG79_00158 | Mitochondrial trans-2-enoyl-CoA reductase. | TetR family transcriptional regulator. | 0.861 |
ARO13660.1 | ARO13661.1 | BVG79_00302 | BVG79_00303 | Auxin efflux carrier family protein. | Hypothetical protein; Belongs to the UPF0178 family. | 0.863 |
ARO13660.1 | fghA | BVG79_00302 | BVG79_00154 | Auxin efflux carrier family protein. | S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.422 |
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