STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO13577.1Oxidoreductase, FAD-binding protein. (341 aa)    
Predicted Functional Partners:
mnmC
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein.
 
     0.767
ARO13575.1
S-adenosylmethionine uptake transporter.
       0.736
ARO15176.1
Hypothetical protein.
  
     0.645
ARO13744.1
Hypothetical protein.
  
     0.552
ARO14959.1
Hypothetical protein.
  
     0.501
ARO13995.1
Rhomboid family protein.
  
    0.481
ARO15160.1
Hypothetical protein.
  
     0.477
aprt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
    0.427
recD
Exodeoxyribonuclease V.
  
     0.415
ARO14119.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.