STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO13613.1NAD(P)H nitroreductase. (189 aa)    
Predicted Functional Partners:
ARO13614.1
Hypothetical protein; Belongs to the UPF0235 family.
       0.693
gltB
Glutamate synthase (NADPH/NADH) large chain.
     
 0.634
ARO13615.1
Peptidase, M48 family.
       0.584
parA
Chromosome partitioning protein.
     
 0.444
ARO13722.1
ABC transporter permease.
  
  
 0.443
ARO14244.1
ABC transporter.
  
  
 0.443
ARO15602.1
Antibiotic transport system permease protein.
  
  
 0.443
ybdK
Periplasmic sensor signal transduction histidine kinase.
      
 0.439
parA-2
Chromosome partitioning protein ParA.
     
 0.433
tadA
Cytidine and deoxycytidylate deaminase family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.428
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.