Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARO13695.1 | ARO13696.1 | BVG79_00339 | BVG79_00340 | Aminotransferase, class V. | Hypothetical protein. | 0.542 |
ARO13695.1 | ARO13697.1 | BVG79_00339 | BVG79_00341 | Aminotransferase, class V. | Transglutaminase. | 0.436 |
ARO13695.1 | ARO13797.1 | BVG79_00339 | BVG79_00443 | Aminotransferase, class V. | Hypothetical protein. | 0.760 |
ARO13695.1 | ARO14333.1 | BVG79_00339 | BVG79_00985 | Aminotransferase, class V. | Fe-S metabolism associated family protein. | 0.764 |
ARO13695.1 | ARO14358.1 | BVG79_00339 | BVG79_01012 | Aminotransferase, class V. | Hypothetical protein. | 0.951 |
ARO13695.1 | iscA | BVG79_00339 | BVG79_01172 | Aminotransferase, class V. | HesB/YadR/YfhF; Belongs to the HesB/IscA family. | 0.425 |
ARO13695.1 | sufB | BVG79_00339 | BVG79_01046 | Aminotransferase, class V. | Fe-S cluster assembly protein SufB. | 0.826 |
ARO13695.1 | sufC | BVG79_00339 | BVG79_01048 | Aminotransferase, class V. | FeS assembly ATPase SufC. | 0.853 |
ARO13695.1 | sufD | BVG79_00339 | BVG79_01049 | Aminotransferase, class V. | SufBD protein. | 0.824 |
ARO13695.1 | ttcA | BVG79_00339 | BVG79_02169 | Aminotransferase, class V. | tRNA 2-thiocytidine biosynthesis protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. | 0.914 |
ARO13696.1 | ARO13695.1 | BVG79_00340 | BVG79_00339 | Hypothetical protein. | Aminotransferase, class V. | 0.542 |
ARO13696.1 | ARO13697.1 | BVG79_00340 | BVG79_00341 | Hypothetical protein. | Transglutaminase. | 0.572 |
ARO13697.1 | ARO13695.1 | BVG79_00341 | BVG79_00339 | Transglutaminase. | Aminotransferase, class V. | 0.436 |
ARO13697.1 | ARO13696.1 | BVG79_00341 | BVG79_00340 | Transglutaminase. | Hypothetical protein. | 0.572 |
ARO13797.1 | ARO13695.1 | BVG79_00443 | BVG79_00339 | Hypothetical protein. | Aminotransferase, class V. | 0.760 |
ARO14333.1 | ARO13695.1 | BVG79_00985 | BVG79_00339 | Fe-S metabolism associated family protein. | Aminotransferase, class V. | 0.764 |
ARO14333.1 | sufB | BVG79_00985 | BVG79_01046 | Fe-S metabolism associated family protein. | Fe-S cluster assembly protein SufB. | 0.789 |
ARO14333.1 | sufC | BVG79_00985 | BVG79_01048 | Fe-S metabolism associated family protein. | FeS assembly ATPase SufC. | 0.743 |
ARO14333.1 | sufD | BVG79_00985 | BVG79_01049 | Fe-S metabolism associated family protein. | SufBD protein. | 0.740 |
ARO14358.1 | ARO13695.1 | BVG79_01012 | BVG79_00339 | Hypothetical protein. | Aminotransferase, class V. | 0.951 |
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