STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malLOligo-1,6-glucosidase. (565 aa)    
Predicted Functional Partners:
melA
Alpha-galactosidase.
    
 0.952
malZ
Alpha amylase catalytic region.
  
  
 
0.917
ARO13824.1
Transcriptional regulator protein, LacI family.
 
  
 0.814
gltB
Glutamate synthase (NADPH/NADH) large chain.
     
 0.617
ycjO
Inner membrane putative ABC superfamily sugar transporter permease.
  
  
 0.580
ARO13820.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 0.538
ycjP
Multiple sugar transport system permease protein.
  
  
 0.523
ARO13821.1
Hypothetical protein.
     
 0.480
ycjN
Multiple sugar transport system substrate-binding protein.
  
  
 0.460
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.