STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO13993.1Hypothetical protein. (369 aa)    
Predicted Functional Partners:
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.752
ARO13969.1
Hypothetical protein.
  
     0.674
ARO14950.1
Putative flagellar switch protein FliM.
  
     0.639
ARO15600.1
ABC transporter substrate-binding protein.
  
     0.620
ARO14339.1
Hypothetical protein.
  
     0.613
ARO13992.1
UspA domain protein.
       0.609
ARO15075.1
Hypothetical protein.
  
     0.590
ARO13444.1
Molybdenum cofactor cytidylyltransferase.
  
     0.577
ARO13740.1
GCN5-related N-acetyltransferase.
  
     0.568
ARO14996.1
Hypothetical protein.
  
     0.560
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.