STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaEMonovalent cation/H+ antiporter subunit E. (162 aa)    
Predicted Functional Partners:
phaC
Monovalent cation/H+ antiporter subunit C.
 
 
 0.999
phaD
NADH/Ubiquinone/plastoquinone (Complex I) precursor.
 
 0.999
phaF
Monovalent cation/H+ antiporter subunit F.
 
 
 0.999
phaG
Monovalent cation/H+ antiporter subunit G.
 
 
 0.999
phaA
NADH dehydrogenase (Quinone).
 
 
 0.992
nuoL
NADH-quinone oxidoreductase subunit L.
  
 
 0.852
ARO14119.1
Hypothetical protein.
       0.777
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
 
 0.460
copB-2
Cu2+-exporting ATPase.
  
    0.433
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.