STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO14140.1NitT/TauT family transport system permease protein. (323 aa)    
Predicted Functional Partners:
ARO14139.1
ABC nitrate transporter, nucleotide binding/ATPase protein.
 
  
 0.960
ARO14142.1
ABC transporter substrate-binding protein.
 
  
 0.926
hydA
Dihydropyrimidinase protein.
 
     0.905
ARO14141.1
NitT/TauT family transport system permease protein.
 
    
0.836
ARO13395.1
Twin-arginine translocation pathway signal.
 
  
 0.811
ssuB-2
Nitrate/sulfonate/bicarbonate ABC transporter ATPase.
 
  
 0.788
cmpD
ABC transporter.
 
  
 0.734
ssuC-2
ABC transporter inner membrane protein.
 
    0.731
ssuB
ABC transporter related protein.
 
  
 0.675
tauC
Binding-protein-dependent transporters inner membrane component.
 
    0.664
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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