STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO14184.1Acetyltransferase, GNAT family protein. (154 aa)    
Predicted Functional Partners:
bmpA
Basic membrane lipoprotein.
       0.773
yphE-3
Sugar ABC transporter.
       0.773
yphD-2
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.773
yphD-3
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.773
yaaF
Inosine/uridine-preferring nucleoside hydrolase.
       0.702
mtaD-2
5-methylthioadenosine/S-adenosylhomocysteine deaminase.
       0.697
cdd
Cytidine deaminase.
 
     0.568
lacI
LacI family transcriptional regulator.
       0.483
ARO14176.1
Creatinine amidohydrolase.
       0.483
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.