STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO14250.1Hypothetical protein. (59 aa)    
Predicted Functional Partners:
chpT
Histidine phosphotransferase ChpT.
       0.733
ARO15162.1
MotA/TolQ/ExbB proton channel family protein.
  
     0.509
plsC-2
1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
     0.498
ARO15209.1
Sporulation and cell division repeat protein.
  
     0.486
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
       0.455
yigA
yigA.
  
     0.436
ARO14347.1
Hypothetical protein.
  
     0.434
ARO14319.1
Hypothetical protein.
  
     0.430
gltD
Glutamate synthase (NADPH/NADH) small chain.
  
     0.418
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.