STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO14279.1Phage protein. (281 aa)    
Predicted Functional Partners:
ARO14278.1
Hypothetical protein.
 
 
 
 0.999
ARO14281.1
Hypothetical protein.
 
 
   0.999
ARO14274.1
Hypothetical protein.
 
 
   0.993
ARO14271.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
 
 
 0.992
ARO14272.1
Head-tail adaptor.
 
 
 
 0.992
ARO14273.1
Hypothetical protein.
 
 
   0.992
ARO14270.1
HK97 family major capsid protein.
 
 
 0.985
ARO14267.1
Phage portal protein.
 
   0.982
ARO14280.1
NlpC/P60 family phage cell wall peptidase.
 
     0.967
ARO14275.1
Hypothetical protein.
 
     0.966
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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