STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacI-2HTH-type transcriptional regulator aglR. (356 aa)    
Predicted Functional Partners:
bglA
6-phospho-beta-glucosidase.
 
   
 0.848
aglE
Extracellular solute-binding protein.
 
     0.820
gltB
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.812
aglF
ABC alpha-glucoside transporter inner membrane protein AglF.
 
     0.804
aglG
Binding-protein-dependent transporters inner membrane component.
 
     0.780
malZ
Alpha amylase catalytic region.
 
  
 0.693
ARO13598.1
Phosphocarrier protein HPr.
   
 
 0.651
aglK
ABC transporter; Belongs to the ABC transporter superfamily.
 
    0.616
ARO14106.1
Ribose transport system substrate-binding protein.
 
  
 0.450
glpK
Glycerol kinase.
 
 
 
 0.439
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.