Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARO14801.1 | ARO15658.1 | BVG79_01455 | BVG79_02318 | Chaperone protein DnaJ. | Hypothetical protein. | 0.510 |
ARO14801.1 | thiE | BVG79_01455 | BVG79_01412 | Chaperone protein DnaJ. | Thiamine-phosphate pyrophosphorylase. | 0.427 |
ARO14801.1 | yigA | BVG79_01455 | BVG79_01483 | Chaperone protein DnaJ. | yigA. | 0.434 |
ARO15658.1 | ARO14801.1 | BVG79_02318 | BVG79_01455 | Hypothetical protein. | Chaperone protein DnaJ. | 0.510 |
ARO15658.1 | thiE | BVG79_02318 | BVG79_01412 | Hypothetical protein. | Thiamine-phosphate pyrophosphorylase. | 0.531 |
ctaA | lasT | BVG79_01410 | BVG79_01411 | Cytochrome oxidase assembly protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | tRNA/rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | 0.863 |
ctaA | thiE | BVG79_01410 | BVG79_01412 | Cytochrome oxidase assembly protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | Thiamine-phosphate pyrophosphorylase. | 0.684 |
ctaA | ypwA | BVG79_01410 | BVG79_01409 | Cytochrome oxidase assembly protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | Thermostable carboxypeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.868 |
gltB | guaB | BVG79_02092 | BVG79_01307 | Glutamate synthase (NADPH/NADH) large chain. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.829 |
gltB | moeB | BVG79_02092 | BVG79_00267 | Glutamate synthase (NADPH/NADH) large chain. | Molybdenum cofactor synthesis protein 3. | 0.407 |
gltB | thiE | BVG79_02092 | BVG79_01412 | Glutamate synthase (NADPH/NADH) large chain. | Thiamine-phosphate pyrophosphorylase. | 0.476 |
guaB | gltB | BVG79_01307 | BVG79_02092 | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Glutamate synthase (NADPH/NADH) large chain. | 0.829 |
guaB | thiE | BVG79_01307 | BVG79_01412 | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Thiamine-phosphate pyrophosphorylase. | 0.496 |
lasT | ctaA | BVG79_01411 | BVG79_01410 | tRNA/rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | Cytochrome oxidase assembly protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.863 |
lasT | thiE | BVG79_01411 | BVG79_01412 | tRNA/rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | Thiamine-phosphate pyrophosphorylase. | 0.723 |
lasT | ypwA | BVG79_01411 | BVG79_01409 | tRNA/rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | Thermostable carboxypeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.863 |
moeB | gltB | BVG79_00267 | BVG79_02092 | Molybdenum cofactor synthesis protein 3. | Glutamate synthase (NADPH/NADH) large chain. | 0.407 |
moeB | thiE | BVG79_00267 | BVG79_01412 | Molybdenum cofactor synthesis protein 3. | Thiamine-phosphate pyrophosphorylase. | 0.751 |
pstS | thiE | BVG79_01645 | BVG79_01412 | Phosphate ABC transporter periplasmic phosphate-binding protein. | Thiamine-phosphate pyrophosphorylase. | 0.499 |
thiE | ARO14801.1 | BVG79_01412 | BVG79_01455 | Thiamine-phosphate pyrophosphorylase. | Chaperone protein DnaJ. | 0.427 |
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