STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO14893.1Glycerol-3-phosphate ABC transporter substrate-binding protein. (428 aa)    
Predicted Functional Partners:
ugpE-3
Sugar ABC transporter permease.
 
   0.948
smoF
ABC transporter permease.
 
   0.946
ycjP
Multiple sugar transport system permease protein.
 
   0.819
ycjO
Inner membrane putative ABC superfamily sugar transporter permease.
 
   0.803
ugpE-2
Sn-glycerol 3-phosphate transport system permease protein.
 
   0.792
ARO14892.1
Hypothetical protein.
 
     0.778
ycjP-3
Binding-protein-dependent transporters inner membrane component.
 
   0.778
ycjO-2
Multiple sugar transport system permease protein.
 
   0.776
ugpE
Sn-glycerol-3-phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
   0.768
ycjO-4
Sugar ABC transporter transmembrane protein.
 
   0.743
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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