STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iclRIclR family transcriptional regulator, pca regulon regulatory protein. (263 aa)    
Predicted Functional Partners:
folD
Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.774
folD-2
Methylenetetrahydrofolate dehydrogenase (NADP+).
       0.774
ARO15028.1
ABC transporter substrate-binding protein.
       0.773
ARO15032.1
Hypothetical protein.
       0.686
ARO15025.1
NAD(P)H dehydrogenase protein.
  
    0.604
ARO15024.1
FAD linked oxidase protein.
  
    0.601
ARO15022.1
Creatininase subfamily.
       0.595
codA-2
Cytosine deaminase.
       0.595
cmpD
ABC transporter.
       0.594
ARO15027.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
       0.594
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.