Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARO13575.1 | sam | BVG79_00215 | BVG79_01689 | S-adenosylmethionine uptake transporter. | S-adenosylmethionine uptake transporter. | 0.738 |
ARO14588.1 | ARO15035.1 | BVG79_01242 | BVG79_01691 | LmbE family protein. | Xylose repressor. | 0.680 |
ARO14588.1 | ARO15041.1 | BVG79_01242 | BVG79_01697 | LmbE family protein. | Ribokinase-like domain-containing protein. | 0.582 |
ARO14588.1 | argH-2 | BVG79_01242 | BVG79_01695 | LmbE family protein. | Argininosuccinate lyase 2. | 0.748 |
ARO14588.1 | sam | BVG79_01242 | BVG79_01689 | LmbE family protein. | S-adenosylmethionine uptake transporter. | 0.451 |
ARO14588.1 | ycjN-3 | BVG79_01242 | BVG79_01692 | LmbE family protein. | Sugar ABC transporter substrate-binding protein. | 0.767 |
ARO14588.1 | ycjO-4 | BVG79_01242 | BVG79_01693 | LmbE family protein. | Sugar ABC transporter transmembrane protein. | 0.515 |
ARO15034.1 | ARO15035.1 | BVG79_01690 | BVG79_01691 | LmbE family protein. | Xylose repressor. | 0.919 |
ARO15034.1 | ARO15041.1 | BVG79_01690 | BVG79_01697 | LmbE family protein. | Ribokinase-like domain-containing protein. | 0.727 |
ARO15034.1 | argH-2 | BVG79_01690 | BVG79_01695 | LmbE family protein. | Argininosuccinate lyase 2. | 0.845 |
ARO15034.1 | sam | BVG79_01690 | BVG79_01689 | LmbE family protein. | S-adenosylmethionine uptake transporter. | 0.864 |
ARO15034.1 | ycjN-3 | BVG79_01690 | BVG79_01692 | LmbE family protein. | Sugar ABC transporter substrate-binding protein. | 0.859 |
ARO15034.1 | ycjO-4 | BVG79_01690 | BVG79_01693 | LmbE family protein. | Sugar ABC transporter transmembrane protein. | 0.723 |
ARO15034.1 | ycjP-3 | BVG79_01690 | BVG79_01694 | LmbE family protein. | Binding-protein-dependent transporters inner membrane component. | 0.632 |
ARO15034.1 | ycjV-2 | BVG79_01690 | BVG79_01696 | LmbE family protein. | ATP-binding transport protein smoK; Belongs to the ABC transporter superfamily. | 0.408 |
ARO15035.1 | ARO14588.1 | BVG79_01691 | BVG79_01242 | Xylose repressor. | LmbE family protein. | 0.680 |
ARO15035.1 | ARO15034.1 | BVG79_01691 | BVG79_01690 | Xylose repressor. | LmbE family protein. | 0.919 |
ARO15035.1 | ARO15041.1 | BVG79_01691 | BVG79_01697 | Xylose repressor. | Ribokinase-like domain-containing protein. | 0.739 |
ARO15035.1 | argH-2 | BVG79_01691 | BVG79_01695 | Xylose repressor. | Argininosuccinate lyase 2. | 0.699 |
ARO15035.1 | sam | BVG79_01691 | BVG79_01689 | Xylose repressor. | S-adenosylmethionine uptake transporter. | 0.803 |
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