STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
djlAHeat shock protein DnaJ-like protein. (237 aa)    
Predicted Functional Partners:
ARO14358.1
Hypothetical protein.
  
 
 0.987
iscS
Cysteine desulfurase.
  
 
 0.802
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.753
ARO15170.1
Hypothetical protein.
       0.749
yegD
Molecular chaperone.
  
 
 0.710
parE
Topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.
       0.585
iscA
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
  
 
 0.569
erpA
Iron-sulfur cluster assembly family protein; Belongs to the HesB/IscA family.
  
 
 0.569
grxD
Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
     
 0.507
ARO14015.1
Hypothetical protein.
  
     0.492
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.