STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msmGBinding-protein-dependent transporters inner membrane component. (286 aa)    
Predicted Functional Partners:
msmF
Sugar ABC transporter permease.
 
  0.996
msmE
Extracellular solute-binding protein.
 
  0.992
ycjV-2
ATP-binding transport protein smoK; Belongs to the ABC transporter superfamily.
  0.959
ycjV
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.953
ARO14890.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.952
ARO13820.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.941
ARO14608.1
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
  0.911
kpsM
Cell surface polysaccharide export ABC-2 transporter permease.
     
  0.900
ARO15473.1
ATP-binding protein of mannitol ABC transporter.
   0.879
ycjO
Inner membrane putative ABC superfamily sugar transporter permease.
   0.858
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.