STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kpsMCell surface polysaccharide export ABC-2 transporter permease. (263 aa)    
Predicted Functional Partners:
kpsT-2
Capsular polysaccharide transport system ATP-binding protein.
 
 0.997
kpsT
ABC transporter related protein.
 
 0.996
kpsE-2
Polysaccharide export-assoiated protein.
 
 
 0.994
kpsE
Capsule polysaccharide export protein-like protein.
 
 
 0.977
kpsC
Capsular polysaccharide export protein KpsC.
 
  
 0.951
wza
Polysaccharide biosynthesis/export protein.
 
  
 0.931
msmG
Binding-protein-dependent transporters inner membrane component.
     
  0.900
msmF
Sugar ABC transporter permease.
     
  0.900
msmE
Extracellular solute-binding protein.
     
  0.900
ARO15478.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
  
 0.842
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.