STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aapJGeneral L-amino acid transport system substrate-binding protein. (320 aa)    
Predicted Functional Partners:
aapM
General L-amino acid transport system permease protein.
 
 0.996
aapQ
General L-amino acid transport system permease protein.
 
 
 0.996
aapP
General L-amino acid transport system ATP-binding protein.
 
 0.989
ARO13856.1
ABC transporter related.
 
 
 0.820
glnQ
Polar amino acid transport system ATP-binding protein.
 
 
 0.818
hisM
Histidine transport system permease protein.
 
 
 0.632
ARO13629.1
Polar amino acid ABC transporter inner membrane protein.
 
 
 0.570
ARO15519.1
Hypothetical protein.
       0.547
hisQ
Binding-protein-dependent transporters inner membrane component.
 
 
 0.515
ARO13905.1
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
  
    0.464
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.