STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARO15600.1ABC transporter substrate-binding protein. (338 aa)    
Predicted Functional Partners:
ARO15603.1
Extracellular solute-binding protein.
 
     0.922
ARO15593.1
Peptidase M50.
 
     0.874
tauC
Binding-protein-dependent transporters inner membrane component.
 
  
 0.859
tauB
NitT/TauT family transport system ATP-binding protein.
 
  
 0.839
yfbK
Von Willebrand factor type A.
 
     0.829
ARO15602.1
Antibiotic transport system permease protein.
 
     0.803
drrA-2
Daunorubicin resistance ABC transporter ATPase subunit.
 
     0.734
ARO15597.1
Hypothetical protein.
 
     0.733
ARO15590.1
Cytochrome c551.
 
     0.715
ARO15591.1
Pyrrolo-quinoline quinone.
 
     0.709
Your Current Organism:
Ketogulonicigenium robustum
NCBI taxonomy Id: 92947
Other names: K. robustum, KCTC 0858BP, Ketogulonicigenium robustum Urbance et al. 2001, Ketogulonigenium robustum, NRRL B-21627, strain X6L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.