Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARO15620.1 | ARO15624.1 | BVG79_02280 | BVG79_02284 | Hypothetical protein. | Hypothetical protein. | 0.626 |
ARO15620.1 | ARO15625.1 | BVG79_02280 | BVG79_02285 | Hypothetical protein. | Thymocyte nuclear protein 1. | 0.643 |
ARO15620.1 | gpsA | BVG79_02280 | BVG79_02283 | Hypothetical protein. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.612 |
ARO15620.1 | hemD | BVG79_02280 | BVG79_02281 | Hypothetical protein. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.878 |
ARO15620.1 | tsaD | BVG79_02280 | BVG79_02282 | Hypothetical protein. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.645 |
ARO15624.1 | ARO15620.1 | BVG79_02284 | BVG79_02280 | Hypothetical protein. | Hypothetical protein. | 0.626 |
ARO15624.1 | ARO15625.1 | BVG79_02284 | BVG79_02285 | Hypothetical protein. | Thymocyte nuclear protein 1. | 0.873 |
ARO15624.1 | gpsA | BVG79_02284 | BVG79_02283 | Hypothetical protein. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.863 |
ARO15624.1 | hemD | BVG79_02284 | BVG79_02281 | Hypothetical protein. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.729 |
ARO15624.1 | tsaD | BVG79_02284 | BVG79_02282 | Hypothetical protein. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.863 |
ARO15625.1 | ARO15620.1 | BVG79_02285 | BVG79_02280 | Thymocyte nuclear protein 1. | Hypothetical protein. | 0.643 |
ARO15625.1 | ARO15624.1 | BVG79_02285 | BVG79_02284 | Thymocyte nuclear protein 1. | Hypothetical protein. | 0.873 |
ARO15625.1 | gpsA | BVG79_02285 | BVG79_02283 | Thymocyte nuclear protein 1. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.863 |
ARO15625.1 | hemD | BVG79_02285 | BVG79_02281 | Thymocyte nuclear protein 1. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.729 |
ARO15625.1 | tsaD | BVG79_02285 | BVG79_02282 | Thymocyte nuclear protein 1. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.872 |
engA | gpsA | BVG79_01210 | BVG79_02283 | GTPase, putative; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.950 |
gpsA | ARO15620.1 | BVG79_02283 | BVG79_02280 | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Hypothetical protein. | 0.612 |
gpsA | ARO15624.1 | BVG79_02283 | BVG79_02284 | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Hypothetical protein. | 0.863 |
gpsA | ARO15625.1 | BVG79_02283 | BVG79_02285 | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Thymocyte nuclear protein 1. | 0.863 |
gpsA | engA | BVG79_02283 | BVG79_01210 | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | GTPase, putative; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.950 |
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